Orthogroup:group_2104


Homologs in group_2104

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15835 FBDBKF_15835 Morganella morganii S1 cyoB cytochrome o ubiquinol oxidase subunit I
EHELCC_18435 EHELCC_18435 Morganella morganii S2 cyoB cytochrome o ubiquinol oxidase subunit I
NLDBIP_17270 NLDBIP_17270 Morganella morganii S4 cyoB cytochrome o ubiquinol oxidase subunit I
LHKJJB_17390 LHKJJB_17390 Morganella morganii S3 cyoB cytochrome o ubiquinol oxidase subunit I
HKOGLL_17005 HKOGLL_17005 Morganella morganii S5 cyoB cytochrome o ubiquinol oxidase subunit I
F4V73_RS16475 F4V73_RS16475 Morganella psychrotolerans cyoB cytochrome o ubiquinol oxidase subunit I
PMI_RS00515 PMI_RS00515 Proteus mirabilis HI4320 cyoB cytochrome o ubiquinol oxidase subunit I

Distribution of group_2104 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2104 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2104

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2104.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cyoB 7

Product

# Product Occurence
1 cytochrome o ubiquinol oxidase subunit I 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0843 7 C Energy production and conversion (C) Heme/copper-type cytochrome/quinol oxidase, subunit 1

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02298 7 cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] Oxidative phosphorylation
Metabolic pathways		 Cytochrome o ubiquinol oxidase

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00115 7 Cytochrome C and Quinol oxidase polypeptide I

Annotations of the 247 SwissProt hits

Annotation Number of occurrences
Alternative cytochrome c oxidase subunit 1 1
Cytochrome bo(3) ubiquinol oxidase subunit 1 8
Cytochrome c oxidase polypeptide 1 1
Cytochrome c oxidase polypeptide I+III 1
Cytochrome c oxidase subunit 1 153
Cytochrome c oxidase subunit 1 (Fragment) 34
Cytochrome c oxidase subunit 1+2 3
Cytochrome c oxidase subunit 1-alpha 1
Cytochrome c oxidase subunit 1-beta 1
Heme-copper oxidase subunit I+III 1
Intron-encoded DNA endonuclease aI4 1
Intron-encoded DNA endonuclease aI5 alpha 1
Probable cytochrome c oxidase subunit 1 10
Probable cytochrome c oxidase subunit 1-alpha 3
Probable cytochrome c oxidase subunit 1-beta 1
Probable intron-encoded endonuclease aI2 2
Probable intron-encoded endonuclease aI3 1
Probable intron-encoded endonuclease aI4 1
Probable intron-encoded endonuclease aI5 1
Probable intron-encoded endonuclease aI7 1
Probable intron-encoded endonuclease aI8 1
Probable quinol oxidase subunit 1 13
Putative cytochrome c oxidase subunit 1-beta 2
Quinol oxidase subunit 1 3
Quinol oxidase subunit 1/3 1
Ubiquinol oxidase subunit 1 1

Protein length

Min length 660
Max length 663
Mean length (sd) 662.6 (1.1)
Median length 663.0

Protein length distribution