PF03882


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03882, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03882
Description MukF winged-helix domain

Occurence in the database

PF03882 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1239 FBDBKF_07210 115164 116489 1 mukF chromosome partition protein MukF Morganella morganii S1
1 group_1239 EHELCC_03760 69697 71022 -1 mukF chromosome partition protein MukF Morganella morganii S2
2 group_1239 NLDBIP_03760 69493 70818 -1 mukF chromosome partition protein MukF Morganella morganii S4
3 group_1239 LHKJJB_09590 69607 70932 -1 mukF chromosome partition protein MukF Morganella morganii S3
4 group_1239 HKOGLL_09385 120120 121445 1 mukF chromosome partition protein MukF Morganella morganii S5
5 group_1239 F4V73_RS01395 303443 304768 1 mukF chromosome partition protein MukF Morganella psychrotolerans
6 group_1239 PMI_RS03565 795502 796824 1 mukF chromosome partition protein MukF Proteus mirabilis HI4320