PF03611


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03611, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03611
Description PTS system sugar-specific permease component

Occurence in the database

PF03611 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2328 FBDBKF_18110 23289 24683 1 ulaA PTS ascorbate transporter subunit IIC Morganella morganii S1
1 group_2328 EHELCC_16810 23289 24683 1 ulaA PTS ascorbate transporter subunit IIC Morganella morganii S2
2 group_2328 NLDBIP_17640 31083 32477 -1 ulaA PTS ascorbate transporter subunit IIC Morganella morganii S4
3 group_2328 LHKJJB_17560 31083 32477 -1 ulaA PTS ascorbate transporter subunit IIC Morganella morganii S3
4 group_2328 HKOGLL_17375 31083 32477 -1 ulaA PTS ascorbate transporter subunit IIC Morganella morganii S5
5 group_2328 F4V73_RS10315 174139 175533 1 PTS ascorbate transporter subunit IIC Morganella psychrotolerans
6 group_2328 PMI_RS08705 1906488 1907744 -1 PTS ascorbate transporter subunit IIC Proteus mirabilis HI4320