PF03610


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03610, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03610
Description PTS system fructose IIA component

Occurence in the database

PF03610 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2493 FBDBKF_01630 19046 20014 -1 manX PTS mannose transporter subunit IIAB Morganella morganii S1
1 group_904 FBDBKF_04770 155688 156122 1 agaF PTS galactosamine/N-acetylgalactosamine transporter subunit IIA Morganella morganii S1
2 group_2493 EHELCC_02100 406866 407834 -1 manX PTS mannose transporter subunit IIAB Morganella morganii S2
3 group_904 EHELCC_06060 215145 215579 1 agaF PTS galactosamine/N-acetylgalactosamine transporter subunit IIA Morganella morganii S2
4 group_2493 NLDBIP_01360 272302 273270 1 manX PTS mannose transporter subunit IIAB Morganella morganii S4
5 group_904 NLDBIP_06380 256210 256644 1 agaF PTS galactosamine/N-acetylgalactosamine transporter subunit IIA Morganella morganii S4
6 group_2493 LHKJJB_00675 119415 120383 -1 manX PTS mannose transporter subunit IIAB Morganella morganii S3
7 group_904 LHKJJB_03260 233734 234168 1 agaF PTS galactosamine/N-acetylgalactosamine transporter subunit IIA Morganella morganii S3
8 group_2493 HKOGLL_00715 124926 125894 -1 manX PTS mannose transporter subunit IIAB Morganella morganii S5
9 group_904 HKOGLL_06735 155598 156032 1 agaF PTS galactosamine/N-acetylgalactosamine transporter subunit IIA Morganella morganii S5
10 group_2493 F4V73_RS03970 842078 843061 -1 manX PTS mannose transporter subunit IIAB Morganella psychrotolerans
11 group_904 F4V73_RS09240 1935310 1935744 1 agaF PTS galactosamine/N-acetylgalactosamine transporter subunit IIA Morganella psychrotolerans
12 group_904 PMI_RS10520 2314891 2315325 -1 agaF PTS galactosamine/N-acetylgalactosamine transporter subunit IIA Proteus mirabilis HI4320
13 group_339 PMI_RS11895 2626135 2627583 1 dhaM dihydroxyacetone kinase phosphoryl donor subunit DhaM Proteus mirabilis HI4320