PF03601


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03601, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03601
Description Conserved hypothetical protein 698

Occurence in the database

PF03601 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1976 FBDBKF_14825 66625 67713 1 yeiH Uncharacterized membrane protein YadS, UPF0324 family Morganella morganii S1
1 group_1976 EHELCC_15630 96701 97789 1 yeiH Uncharacterized membrane protein YadS, UPF0324 family Morganella morganii S2
2 group_1976 NLDBIP_16160 96701 97789 1 yeiH Uncharacterized membrane protein YadS, UPF0324 family Morganella morganii S4
3 group_1976 LHKJJB_15680 18897 19985 -1 yeiH Uncharacterized membrane protein YadS, UPF0324 family Morganella morganii S3
4 group_1976 HKOGLL_14800 18109 19197 -1 yeiH Uncharacterized membrane protein YadS, UPF0324 family Morganella morganii S5
5 group_1976 F4V73_RS07625 1596096 1597184 1 YeiH family protein Morganella psychrotolerans
6 group_1976 PMI_RS04120 920360 921445 -1 YeiH family protein Proteus mirabilis HI4320