Orthogroup:group_2012


Homologs in group_2012

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15120 FBDBKF_15120 Morganella morganii S1 yafJ putative glutamine amidotransferase YafJ
EHELCC_11125 EHELCC_11125 Morganella morganii S2 yafJ putative glutamine amidotransferase YafJ
NLDBIP_11470 NLDBIP_11470 Morganella morganii S4 yafJ putative glutamine amidotransferase YafJ
LHKJJB_11330 LHKJJB_11330 Morganella morganii S3 yafJ putative glutamine amidotransferase YafJ
HKOGLL_09940 HKOGLL_09940 Morganella morganii S5 yafJ putative glutamine amidotransferase YafJ
F4V73_RS12325 F4V73_RS12325 Morganella psychrotolerans - class II glutamine amidotransferase
PMI_RS01675 PMI_RS01675 Proteus mirabilis HI4320 - class II glutamine amidotransferase

Distribution of group_2012 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2012 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2012

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2012.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yafJ 5
2 - 2

Product

# Product Occurence
1 putative glutamine amidotransferase YafJ 5
2 class II glutamine amidotransferase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0121 7 R General function prediction only (R) Predicted glutamine amidotransferase YafJ

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13230 7 Glutamine amidotransferases class-II

Annotations of the 8 SwissProt hits

Annotation Number of occurrences
Amidophosphoribosyltransferase 1
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2
Probable glutamine amidotransferase DUG3 1
Putative glutamine amidotransferase HI_1037 1
Putative glutamine amidotransferase YafJ 1
Putative glutamine amidotransferase slr0199 1
Uncharacterized protein MJ1515 1

Protein length

Min length 255
Max length 258
Mean length (sd) 257.6 (1.1)
Median length 258.0

Protein length distribution