PF03589


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03589, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03589
Description Antitermination protein

Occurence in the database

PF03589 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1789 FBDBKF_13180 25442 26227 -1 Antitermination protein Morganella morganii S1
1 group_1789 EHELCC_08915 248964 249749 1 Antitermination protein Morganella morganii S2
2 group_1789 NLDBIP_09240 248964 249749 1 Antitermination protein Morganella morganii S4
3 group_1789 LHKJJB_05025 7410 8195 -1 Antitermination protein Morganella morganii S3
4 group_1789 HKOGLL_05890 233555 234340 1 Antitermination protein Morganella morganii S5
5 group_1789 F4V73_RS02035 439894 440667 1 antitermination protein Morganella psychrotolerans
6 group_1789 PMI_RS08450 1840978 1841793 -1 antitermination protein Proteus mirabilis HI4320