PF03547
Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF03547
Protein list: lists the 9 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.
Description
| External link |
PF03547 |
| Description |
Membrane transport protein |
Occurence in the database
| PF03547 is associated with 9 different
proteins
|
|
The 9 proteins are classified into 2 different orthogroup(s)
|
|
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
| 0 |
group_745 |
FBDBKF_02440 |
182653 |
183558 |
1 |
yfdV |
putative permease, AEC (auxin efflux carrier) family |
Morganella morganii S1 |
| 1 |
group_745 |
EHELCC_02910 |
570473 |
571378 |
1 |
yfdV |
putative permease, AEC (auxin efflux carrier) family |
Morganella morganii S2 |
| 2 |
group_745 |
NLDBIP_00550 |
108758 |
109663 |
-1 |
yfdV |
putative permease, AEC (auxin efflux carrier) family |
Morganella morganii S4 |
| 3 |
group_745 |
LHKJJB_01485 |
283022 |
283927 |
1 |
yfdV |
putative permease, AEC (auxin efflux carrier) family |
Morganella morganii S3 |
| 4 |
group_745 |
HKOGLL_01525 |
288533 |
289438 |
1 |
yfdV |
putative permease, AEC (auxin efflux carrier) family |
Morganella morganii S5 |
| 5 |
group_3818 |
F4V73_RS00750 |
157303 |
158250 |
-1 |
|
AEC family transporter |
Morganella psychrotolerans |
| 6 |
group_745 |
F4V73_RS04820 |
1024318 |
1025223 |
1 |
|
AEC family transporter |
Morganella psychrotolerans |
| 7 |
group_745 |
PMI_RS05875 |
1286640 |
1287548 |
1 |
|
AEC family transporter |
Proteus mirabilis HI4320 |
| 8 |
group_3818 |
PMI_RS09520 |
2076748 |
2077671 |
-1 |
|
AEC family transporter |
Proteus mirabilis HI4320 |