PF03319


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03319, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03319
Description Ethanolamine utilisation protein EutN/carboxysome

Occurence in the database

PF03319 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1273 FBDBKF_07565 24215 24502 1 eutN ethanolamine utilization microcompartment protein EutN Morganella morganii S1
1 group_1273 EHELCC_17235 51865 52152 1 eutN ethanolamine utilization microcompartment protein EutN Morganella morganii S2
2 group_1273 NLDBIP_13840 19284 19571 1 eutN ethanolamine utilization microcompartment protein EutN Morganella morganii S4
3 group_1273 LHKJJB_09010 140178 140465 -1 eutN ethanolamine utilization microcompartment protein EutN Morganella morganii S3
4 group_1273 HKOGLL_08560 140178 140465 -1 eutN ethanolamine utilization microcompartment protein EutN Morganella morganii S5
5 group_1273 F4V73_RS13555 346294 346581 -1 eutN ethanolamine utilization microcompartment protein EutN Morganella psychrotolerans
6 group_1273 PMI_RS13395 2969932 2970195 -1 EutN/CcmL family microcompartment protein Proteus mirabilis HI4320