PF03245


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03245, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03245
Description Bacteriophage Rz lysis protein

Occurence in the database

PF03245 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2900 FBDBKF_12820 71569 72018 -1 lysis protein Morganella morganii S1
1 group_2900 PMI_RS02445 544685 545146 1 lysis protein Proteus mirabilis HI4320
2 group_2900 PMI_RS04515 1003188 1003649 1 lysis protein Proteus mirabilis HI4320
3 group_2900 PMI_RS04715 1038660 1039124 1 lysis protein Proteus mirabilis HI4320
4 group_2900 PMI_RS08435 1839444 1839893 -1 lysis system i-spanin subunit Rz Proteus mirabilis HI4320
5 group_2900 PMI_RS09785 2130265 2130768 -1 lysis protein Proteus mirabilis HI4320