Homologs in group_2900

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5 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS02445 PMI_RS02445 53.0 Proteus mirabilis HI4320 - lysis protein
PMI_RS04515 PMI_RS04515 53.7 Proteus mirabilis HI4320 - lysis protein
PMI_RS04715 PMI_RS04715 53.0 Proteus mirabilis HI4320 - lysis protein
PMI_RS08435 PMI_RS08435 51.0 Proteus mirabilis HI4320 - lysis system i-spanin subunit Rz
PMI_RS09785 PMI_RS09785 33.1 Proteus mirabilis HI4320 - lysis protein

Distribution of the homologs in the orthogroup group_2900

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2900

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P27358 6.07e-19 80 36 6 160 3 Rz Spanin, inner membrane subunit Enterobacteria phage P21
P00726 3.97e-18 79 35 6 157 1 Rz Spanin, inner membrane subunit Escherichia phage lambda
P75719 4.09e-17 76 40 4 134 3 rzpD Prophage Rz endopeptidase RzpD Escherichia coli (strain K12)
P77551 6.59e-16 71 44 3 100 5 rzpR Putative endopeptidase RzpR Escherichia coli (strain K12)
P13583 2.88e-14 68 33 2 131 3 15 Spanin, inner membrane subunit Salmonella phage P22
Q9XJJ6 4.18e-14 68 30 3 147 3 Rz Spanin, inner membrane subunit Escherichia phage 933W

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12820
Feature type CDS
Gene -
Product lysis protein
Location 71569 - 72018 (strand: -1)
Length 450 (nucleotides) / 149 (amino acids)

Contig

Accession contig_15
Length 114235 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2900
Orthogroup size 6
N. genomes 2

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Genomic region

Domains

PF03245 Bacteriophage Rz lysis protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K14744 prophage endopeptidase [EC:3.4.-.-] - -

Protein Sequence

MNWKEALIAVLFIAVAWWVYDTYRDNQQLKVDNITLSGQLAEQIAENEKYQERTQKLHELDTRHTQELANAKTEIDRLRVAADRNPERVYIKASCPKTGSDTATGMDDAAPARPDDTAVRNYWLLRERIAESEQMIKGLQDYIKTQCVN

Flanking regions ( +/- flanking 50bp)

CTGTCGGGTAATTTGTTGGACGGGGTGATCCATTATGAGTGTGAAGCGCCATGAACTGGAAAGAAGCGTTAATTGCTGTGCTGTTTATTGCTGTTGCATGGTGGGTATATGACACCTACCGGGATAACCAGCAACTGAAGGTAGATAACATAACCCTGAGTGGTCAGCTTGCAGAGCAGATAGCGGAGAATGAAAAATATCAGGAACGCACACAGAAACTTCATGAACTGGACACCAGGCACACACAGGAACTGGCAAATGCAAAAACTGAAATTGACCGGCTGCGTGTTGCTGCTGACCGTAACCCTGAACGGGTGTACATCAAAGCCAGTTGTCCAAAGACCGGCAGCGATACCGCCACCGGCATGGATGATGCAGCCCCCGCCCGACCTGATGACACCGCTGTCAGAAATTATTGGTTACTCAGAGAGCGAATTGCAGAGTCAGAGCAGATGATTAAAGGGTTGCAGGATTACATTAAAACTCAGTGTGTGAATTAAGCTATGGGGTAGTTGGTAATAAATCGTCAGCGGTACCCTGTTCCTTTAAT