PF03239


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03239, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03239
Description Iron permease FTR1 family

Occurence in the database

PF03239 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1679 FBDBKF_11720 130910 131749 1 fTR1 High-affinity Fe2+/Pb2+ permease Morganella morganii S1
1 group_1679 EHELCC_17640 29253 30092 1 fTR1 High-affinity Fe2+/Pb2+ permease Morganella morganii S2
2 group_1679 NLDBIP_19310 5198 6037 1 fTR1 High-affinity Fe2+/Pb2+ permease Morganella morganii S4
3 group_1679 LHKJJB_18080 29253 30092 1 fTR1 High-affinity Fe2+/Pb2+ permease Morganella morganii S3
4 group_1679 HKOGLL_19000 11962 12801 -1 fTR1 High-affinity Fe2+/Pb2+ permease Morganella morganii S5
5 group_1679 F4V73_RS07975 1663182 1664021 -1 FTR1 family protein Morganella psychrotolerans
6 group_1679 PMI_RS00845 211703 212539 -1 FTR1 family protein Proteus mirabilis HI4320