PF03109


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03109, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03109
Description ABC1 atypical kinase-like domain

Occurence in the database

PF03109 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2215 FBDBKF_16930 13349 14986 -1 ubiB ubiquinone biosynthesis regulatory protein kinase UbiB Morganella morganii S1
1 group_2215 EHELCC_16660 53524 55161 1 ubiB ubiquinone biosynthesis regulatory protein kinase UbiB Morganella morganii S2
2 group_2215 NLDBIP_16870 53524 55161 1 ubiB ubiquinone biosynthesis regulatory protein kinase UbiB Morganella morganii S4
3 group_2215 LHKJJB_16600 13349 14986 -1 ubiB ubiquinone biosynthesis regulatory protein kinase UbiB Morganella morganii S3
4 group_2215 HKOGLL_17565 13349 14986 -1 ubiB ubiquinone biosynthesis regulatory protein kinase UbiB Morganella morganii S5
5 group_2215 F4V73_RS18400 13496 15133 -1 ubiB ubiquinone biosynthesis regulatory protein kinase UbiB Morganella psychrotolerans
6 group_2215 PMI_RS17585 3859674 3861311 1 ubiB ubiquinone biosynthesis regulatory protein kinase UbiB Proteus mirabilis HI4320