Orthogroup:group_2250


Homologs in group_2250

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17350 FBDBKF_17350 Morganella morganii S1 xseB exodeoxyribonuclease VII small subunit
EHELCC_17245 EHELCC_17245 Morganella morganii S2 xseB exodeoxyribonuclease VII small subunit
NLDBIP_17950 NLDBIP_17950 Morganella morganii S4 xseB exodeoxyribonuclease VII small subunit
LHKJJB_17870 LHKJJB_17870 Morganella morganii S3 xseB exodeoxyribonuclease VII small subunit
HKOGLL_17880 HKOGLL_17880 Morganella morganii S5 xseB exodeoxyribonuclease VII small subunit
F4V73_RS16525 F4V73_RS16525 Morganella psychrotolerans xseB exodeoxyribonuclease VII small subunit
PMI_RS00460 PMI_RS00460 Proteus mirabilis HI4320 xseB exodeoxyribonuclease VII small subunit

Distribution of group_2250 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2250 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2250

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2250.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 xseB 7

Product

# Product Occurence
1 exodeoxyribonuclease VII small subunit 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1722 7 L Replication, recombination and repair (L) Exonuclease VII small subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03602 7 exodeoxyribonuclease VII small subunit [EC:3.1.11.6] Mismatch repair -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02609 7 Exonuclease VII small subunit

Annotations of the 400 SwissProt hits

Annotation Number of occurrences
Exodeoxyribonuclease 7 small subunit 400

Protein length

Min length 84
Max length 96
Mean length (sd) 93.0 (5.2)
Median length 96.0

Protein length distribution