PF02885


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02885, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02885
Description Glycosyl transferase family, helical bundle domain

Occurence in the database

PF02885 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2683 FBDBKF_05165 40562 41560 1 trpD Anthranilate phosphoribosyltransferase, glycosyltransferase domain Morganella morganii S1
1 group_2313 FBDBKF_17760 12853 14175 -1 deoA thymidine phosphorylase Morganella morganii S1
2 group_2313 EHELCC_09785 192285 193607 -1 deoA thymidine phosphorylase Morganella morganii S2
3 group_2683 EHELCC_12425 139934 140932 -1 trpD Anthranilate phosphoribosyltransferase, glycosyltransferase domain Morganella morganii S2
4 group_2313 NLDBIP_10165 192285 193607 -1 deoA thymidine phosphorylase Morganella morganii S4
5 group_2683 NLDBIP_12765 139889 140887 -1 trpD Anthranilate phosphoribosyltransferase, glycosyltransferase domain Morganella morganii S4
6 group_2313 LHKJJB_07590 23631 24953 1 deoA thymidine phosphorylase Morganella morganii S3
7 group_2683 LHKJJB_12625 139934 140932 -1 trpD Anthranilate phosphoribosyltransferase, glycosyltransferase domain Morganella morganii S3
8 group_2313 HKOGLL_07140 23631 24953 1 deoA thymidine phosphorylase Morganella morganii S5
9 group_2683 HKOGLL_11240 139934 140932 -1 trpD Anthranilate phosphoribosyltransferase, glycosyltransferase domain Morganella morganii S5
10 group_2683 F4V73_RS05620 1195795 1196793 1 trpD anthranilate phosphoribosyltransferase Morganella psychrotolerans
11 group_2313 F4V73_RS15205 21089 22411 1 deoA thymidine phosphorylase Morganella psychrotolerans
12 group_2313 PMI_RS11950 2642522 2643844 -1 deoA thymidine phosphorylase Proteus mirabilis HI4320