PF02878


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02878, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02878
Description Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I

Occurence in the database

PF02878 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1400 FBDBKF_08640 109999 111333 1 glmM phosphoglucosamine mutase Morganella morganii S1
1 group_1529 FBDBKF_09875 71070 72710 -1 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) Morganella morganii S1
2 group_1529 EHELCC_04675 263035 264675 -1 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) Morganella morganii S2
3 group_1400 EHELCC_12885 52392 53726 -1 glmM phosphoglucosamine mutase Morganella morganii S2
4 group_1529 NLDBIP_04675 262831 264471 -1 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) Morganella morganii S4
5 group_1400 NLDBIP_13225 52392 53726 -1 glmM phosphoglucosamine mutase Morganella morganii S4
6 group_1400 LHKJJB_13330 108717 110051 1 glmM phosphoglucosamine mutase Morganella morganii S3
7 group_1529 LHKJJB_13955 70907 72547 1 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) Morganella morganii S3
8 group_1400 HKOGLL_11700 52392 53726 -1 glmM phosphoglucosamine mutase Morganella morganii S5
9 group_1529 HKOGLL_12580 71851 73491 -1 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) Morganella morganii S5
10 group_1529 F4V73_RS00475 99936 101576 1 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) Morganella psychrotolerans
11 group_1400 F4V73_RS09865 77108 78442 1 glmM phosphoglucosamine mutase Morganella psychrotolerans
12 group_1529 PMI_RS02700 589489 591132 1 pgm phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) Proteus mirabilis HI4320
13 group_1400 PMI_RS16995 3740367 3741704 1 glmM phosphoglucosamine mutase Proteus mirabilis HI4320