PF02823


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02823, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02823
Description ATP synthase, Delta/Epsilon chain, beta-sandwich domain

Occurence in the database

PF02823 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2073 FBDBKF_15500 25276 25701 1 atpC F0F1 ATP synthase subunit epsilon Morganella morganii S1
1 group_2073 EHELCC_15860 24576 25001 1 atpC F0F1 ATP synthase subunit epsilon Morganella morganii S2
2 group_2073 NLDBIP_16510 55662 56087 -1 atpC F0F1 ATP synthase subunit epsilon Morganella morganii S4
3 group_2073 LHKJJB_16295 24576 25001 1 atpC F0F1 ATP synthase subunit epsilon Morganella morganii S3
4 group_2073 HKOGLL_16065 24576 25001 1 atpC F0F1 ATP synthase subunit epsilon Morganella morganii S5
5 group_2073 F4V73_RS17645 171440 171865 -1 F0F1 ATP synthase subunit epsilon Morganella psychrotolerans
6 group_2073 PMI_RS15180 3367929 3368345 1 F0F1 ATP synthase subunit epsilon Proteus mirabilis HI4320