PF02777


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02777, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02777
Description Iron/manganese superoxide dismutases, C-terminal domain

Occurence in the database

PF02777 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1024 FBDBKF_05745 151630 152208 1 sodB superoxide dismutase [Fe] Morganella morganii S1
1 group_1604 FBDBKF_10480 51774 52394 -1 sodA superoxide dismutase [Mn] Morganella morganii S1
2 group_1024 EHELCC_11845 29286 29864 -1 sodB superoxide dismutase [Fe] Morganella morganii S2
3 group_1604 EHELCC_14815 51764 52384 -1 sodA superoxide dismutase [Mn] Morganella morganii S2
4 group_1024 NLDBIP_12185 29241 29819 -1 sodB superoxide dismutase [Fe] Morganella morganii S4
5 group_1604 NLDBIP_14645 51764 52384 -1 sodA superoxide dismutase [Mn] Morganella morganii S4
6 group_1024 LHKJJB_12045 29286 29864 -1 sodB superoxide dismutase [Fe] Morganella morganii S3
7 group_1604 LHKJJB_14700 89342 89962 1 sodA superoxide dismutase [Mn] Morganella morganii S3
8 group_1024 HKOGLL_10660 29286 29864 -1 sodB superoxide dismutase [Fe] Morganella morganii S5
9 group_1604 HKOGLL_13320 89342 89962 1 sodA superoxide dismutase [Mn] Morganella morganii S5
10 group_1024 F4V73_RS03585 765458 766036 -1 sodB superoxide dismutase [Fe] Morganella psychrotolerans
11 group_1604 F4V73_RS14190 53634 54254 -1 sodA superoxide dismutase [Mn] Morganella psychrotolerans
12 group_1024 PMI_RS06750 1473407 1473985 1 sodB superoxide dismutase [Fe] Proteus mirabilis HI4320
13 group_1604 PMI_RS15020 3332008 3332631 -1 sodA superoxide dismutase [Mn] Proteus mirabilis HI4320