PF02627


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02627, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02627
Description Carboxymuconolactone decarboxylase family

Occurence in the database

PF02627 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1750 FBDBKF_12200 96715 97050 -1 Carboxymuconolactone decarboxylase family protein Morganella morganii S1
1 group_3054 FBDBKF_18250 14874 15305 1 yciW Alkylhydroperoxidase family enzyme, contains CxxC motif Morganella morganii S1
2 group_1750 EHELCC_14105 37655 37990 1 Carboxymuconolactone decarboxylase family protein Morganella morganii S2
3 group_3054 EHELCC_18285 14747 15178 1 yciW Alkylhydroperoxidase family enzyme, contains CxxC motif Morganella morganii S2
4 group_1750 NLDBIP_15200 41592 41927 1 Carboxymuconolactone decarboxylase family protein Morganella morganii S4
5 group_3054 NLDBIP_18210 14948 15379 1 yciW Alkylhydroperoxidase family enzyme, contains CxxC motif Morganella morganii S4
6 group_1750 LHKJJB_15410 96715 97050 -1 Carboxymuconolactone decarboxylase family protein Morganella morganii S3
7 group_3054 LHKJJB_18405 14786 15217 1 yciW Alkylhydroperoxidase family enzyme, contains CxxC motif Morganella morganii S3
8 group_1750 HKOGLL_14530 83378 83713 -1 Carboxymuconolactone decarboxylase family protein Morganella morganii S5
9 group_3054 HKOGLL_18140 14764 15195 1 yciW Alkylhydroperoxidase family enzyme, contains CxxC motif Morganella morganii S5
10 group_3054 F4V73_RS01780 392975 393406 1 carboxymuconolactone decarboxylase family protein Morganella psychrotolerans
11 group_1750 PMI_RS01330 321534 321872 1 carboxymuconolactone decarboxylase family protein Proteus mirabilis HI4320
12 group_1750 PMI_RS04490 1000049 1000384 -1 carboxymuconolactone decarboxylase family protein Proteus mirabilis HI4320