PF02569


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02569, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02569
Description Pantoate-beta-alanine ligase

Occurence in the database

PF02569 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1306 FBDBKF_08000 132555 133442 -1 panC pantoate--beta-alanine ligase Morganella morganii S1
1 group_1306 EHELCC_13830 106749 107636 -1 panC pantoate--beta-alanine ligase Morganella morganii S2
2 group_1306 NLDBIP_14275 127624 128511 -1 panC pantoate--beta-alanine ligase Morganella morganii S4
3 group_1306 LHKJJB_08575 31238 32125 1 panC pantoate--beta-alanine ligase Morganella morganii S3
4 group_1306 HKOGLL_08125 31238 32125 1 panC pantoate--beta-alanine ligase Morganella morganii S5
5 group_1306 F4V73_RS12985 209634 210494 1 panC pantoate--beta-alanine ligase Morganella psychrotolerans
6 group_1306 PMI_RS00940 231493 232344 -1 panC pantoate--beta-alanine ligase Proteus mirabilis HI4320