PF02470


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02470, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02470
Description MlaD protein

Occurence in the database

PF02470 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_727 FBDBKF_03205 43788 44306 -1 mlaD outer membrane lipid asymmetry maintenance protein MlaD Morganella morganii S1
1 group_294 FBDBKF_07310 146179 147828 1 pqiB intermembrane transport protein PqiB Morganella morganii S1
2 group_294 EHELCC_03660 38358 40007 -1 pqiB intermembrane transport protein PqiB Morganella morganii S2
3 group_727 EHELCC_07330 202797 203315 1 mlaD outer membrane lipid asymmetry maintenance protein MlaD Morganella morganii S2
4 group_294 NLDBIP_03660 38154 39803 -1 pqiB intermembrane transport protein PqiB Morganella morganii S4
5 group_727 NLDBIP_07655 202670 203188 1 mlaD outer membrane lipid asymmetry maintenance protein MlaD Morganella morganii S4
6 group_727 LHKJJB_07190 166416 166934 1 mlaD outer membrane lipid asymmetry maintenance protein MlaD Morganella morganii S3
7 group_294 LHKJJB_09490 38268 39917 -1 pqiB intermembrane transport protein PqiB Morganella morganii S3
8 group_727 HKOGLL_03740 66453 66971 -1 mlaD outer membrane lipid asymmetry maintenance protein MlaD Morganella morganii S5
9 group_294 HKOGLL_09485 151135 152784 1 pqiB intermembrane transport protein PqiB Morganella morganii S5
10 group_294 F4V73_RS01495 334622 336274 1 pqiB intermembrane transport protein PqiB Morganella psychrotolerans
11 group_727 F4V73_RS11715 492821 493333 1 mlaD outer membrane lipid asymmetry maintenance protein MlaD Morganella psychrotolerans
12 group_294 PMI_RS03820 866305 867957 1 pqiB intermembrane transport protein PqiB Proteus mirabilis HI4320
13 group_294 PMI_RS04915 1073436 1075754 -1 MlaD family protein Proteus mirabilis HI4320
14 group_727 PMI_RS18195 3993063 3993599 1 mlaD outer membrane lipid asymmetry maintenance protein MlaD Proteus mirabilis HI4320