PF02410


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF02410
Protein list: lists the 7 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF02410
Description Ribosomal silencing factor during starvation

Occurence in the database

PF02410 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1602 FBDBKF_10070 106678 107004 1 rsfS ribosome silencing factor Morganella morganii S1
1 group_1602 EHELCC_04870 298643 298969 1 rsfS ribosome silencing factor Morganella morganii S2
2 group_1602 NLDBIP_04870 298439 298765 1 rsfS ribosome silencing factor Morganella morganii S4
3 group_1602 LHKJJB_13760 36613 36939 -1 rsfS ribosome silencing factor Morganella morganii S3
4 group_1602 HKOGLL_12775 107459 107785 1 rsfS ribosome silencing factor Morganella morganii S5
5 group_1602 F4V73_RS00265 64632 64958 -1 rsfS ribosome silencing factor Morganella psychrotolerans
6 group_1602 PMI_RS02110 495814 496140 -1 rsfS ribosome silencing factor Proteus mirabilis HI4320