Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF02369
Protein list: lists the 23 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.
Description
| External link | PF02369 |
|---|---|
| Description | Bacterial Ig-like domain (group 1) |
Occurence in the database
| PF02369 is associated with 23 different proteins |
| The 23 proteins are classified into 3 different orthogroup(s) |
| Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
|---|---|---|---|---|---|---|---|---|
| 0 | group_15 | FBDBKF_09475 | 122348 | 132379 | -1 | Big-1 domain-containing protein | Morganella morganii S1 | |
| 1 | group_15 | FBDBKF_09485 | 134164 | 140745 | -1 | Big-1 domain-containing protein | Morganella morganii S1 | |
| 2 | group_3416 | FBDBKF_13710 | 28393 | 31953 | -1 | Big-1 domain-containing protein | Morganella morganii S1 | |
| 3 | group_15 | EHELCC_09925 | 5359 | 11940 | 1 | Big-1 domain-containing protein | Morganella morganii S2 | |
| 4 | group_15 | EHELCC_09935 | 13725 | 23756 | 1 | Big-1 domain-containing protein | Morganella morganii S2 | |
| 5 | group_3416 | EHELCC_11380 | 113269 | 116829 | -1 | Big-1 domain-containing protein | Morganella morganii S2 | |
| 6 | group_15 | NLDBIP_10280 | 192 | 2027 | 1 | invasin domain 3-containing protein | Morganella morganii S4 | |
| 7 | group_3416 | NLDBIP_11725 | 113269 | 116829 | -1 | Big-1 domain-containing protein | Morganella morganii S4 | |
| 8 | group_15 | NLDBIP_19245 | 5357 | 11938 | 1 | Big-1 domain-containing protein | Morganella morganii S4 | |
| 9 | group_15 | NLDBIP_19255 | 13723 | 21948 | 1 | Big-1 domain-containing protein | Morganella morganii S4 | |
| 10 | group_15 | LHKJJB_11075 | 189501 | 191336 | -1 | invasin domain 3-containing protein | Morganella morganii S3 | |
| 11 | group_3416 | LHKJJB_11585 | 113269 | 116829 | -1 | Big-1 domain-containing protein | Morganella morganii S3 | |
| 12 | group_15 | LHKJJB_19115 | 121 | 8346 | -1 | Big-1 domain-containing protein | Morganella morganii S3 | |
| 13 | group_15 | LHKJJB_19125 | 10131 | 16712 | -1 | Big-1 domain-containing protein | Morganella morganii S3 | |
| 14 | group_3416 | HKOGLL_10195 | 113269 | 116829 | -1 | Big-1 domain-containing protein | Morganella morganii S5 | |
| 15 | group_15 | HKOGLL_14135 | 122802 | 124637 | -1 | invasin domain 3-containing protein | Morganella morganii S5 | |
| 16 | group_15 | HKOGLL_18895 | 121 | 8346 | -1 | Big-1 domain-containing protein | Morganella morganii S5 | |
| 17 | group_15 | HKOGLL_18905 | 10131 | 16712 | -1 | Big-1 domain-containing protein | Morganella morganii S5 | |
| 18 | group_15 | F4V73_RS03760 | 797093 | 798655 | -1 | invasin domain 3-containing protein | Morganella psychrotolerans | |
| 19 | group_15 | F4V73_RS10495 | 216304 | 222888 | 1 | invasin domain 3-containing protein | Morganella psychrotolerans | |
| 20 | group_15 | F4V73_RS10505 | 224824 | 234594 | 1 | Ig-like domain-containing protein | Morganella psychrotolerans | |
| 21 | group_15 | PMI_RS00110 | 37240 | 44316 | -1 | Ig-like domain-containing protein | Proteus mirabilis HI4320 | |
| 22 | group_4950 | PMI_RS19225 | 552917 | 553177 | 1 | Ig-like domain-containing protein | Proteus mirabilis HI4320 |
