PF02224


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02224, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02224
Description Cytidylate kinase

Occurence in the database

PF02224 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1228 FBDBKF_07155 103307 103996 1 cmk (d)CMP kinase Morganella morganii S1
1 group_1228 EHELCC_03815 82190 82879 -1 cmk (d)CMP kinase Morganella morganii S2
2 group_1228 NLDBIP_03815 81986 82675 -1 cmk (d)CMP kinase Morganella morganii S4
3 group_1228 LHKJJB_09645 82100 82789 -1 cmk (d)CMP kinase Morganella morganii S3
4 group_1228 HKOGLL_09330 108263 108952 1 cmk (d)CMP kinase Morganella morganii S5
5 group_1228 F4V73_RS01340 291330 292019 1 cmk (d)CMP kinase Morganella psychrotolerans
6 group_1228 PMI_RS03510 782859 783536 1 cmk (d)CMP kinase Proteus mirabilis HI4320