Orthogroup:group_1287


Homologs in group_1287

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07820 FBDBKF_07820 Morganella morganii S1 purR DNA-binding transcriptional regulator, LacI/PurR family
EHELCC_13650 EHELCC_13650 Morganella morganii S2 purR DNA-binding transcriptional regulator, LacI/PurR family
NLDBIP_14095 NLDBIP_14095 Morganella morganii S4 purR DNA-binding transcriptional regulator, LacI/PurR family
LHKJJB_08755 LHKJJB_08755 Morganella morganii S3 purR DNA-binding transcriptional regulator, LacI/PurR family
HKOGLL_08305 HKOGLL_08305 Morganella morganii S5 purR DNA-binding transcriptional regulator, LacI/PurR family
F4V73_RS13225 F4V73_RS13225 Morganella psychrotolerans - LacI family DNA-binding transcriptional regulator
PMI_RS10795 PMI_RS10795 Proteus mirabilis HI4320 - LacI family DNA-binding transcriptional regulator

Distribution of group_1287 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1287 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1287

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1287.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 purR 5
2 - 2

Product

# Product Occurence
1 DNA-binding transcriptional regulator, LacI/PurR family 5
2 LacI family DNA-binding transcriptional regulator 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1609 7 K Transcription (K) DNA-binding transcriptional regulator, LacI/PurR family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00356 7 Bacterial regulatory proteins, lacI family
PF00532 7 Periplasmic binding proteins and sugar binding domain of LacI family

Annotations of the 170 SwissProt hits

Annotation Number of occurrences
Arabinose metabolism transcriptional repressor 3
Catabolite control protein A 12
Catabolite control protein B 1
HTH-type transcriptional regulator AglR 1
HTH-type transcriptional regulator AscG 1
HTH-type transcriptional regulator CelR 1
HTH-type transcriptional regulator Cphy_2742 1
HTH-type transcriptional regulator DegA 1
HTH-type transcriptional regulator GalR 5
HTH-type transcriptional regulator GalS 2
HTH-type transcriptional regulator GntR 3
HTH-type transcriptional regulator IdnR 1
HTH-type transcriptional regulator IpsA 1
HTH-type transcriptional regulator KdgR 1
HTH-type transcriptional regulator MalR 5
HTH-type transcriptional regulator PtxS 3
HTH-type transcriptional regulator RegA 2
HTH-type transcriptional regulator TreR 2
HTH-type transcriptional regulator pepR1 1
HTH-type transcriptional regulator reg1 1
HTH-type transcriptional repressor CytR 4
HTH-type transcriptional repressor MelR 1
HTH-type transcriptional repressor PurR 88
Lactose operon repressor 1
Lactose operon repressor (Fragment) 2
Maltose regulon regulatory protein MalI 1
Maltose regulon regulatory protein MalI (Fragment) 1
NTD biosynthesis operon regulator NtdR 1
Probable HTH-type transcriptional regulator EndR 1
Probable HTH-type transcriptional repressor ExuR 1
Ribose operon repressor 9
Sucrose operon repressor 7
Uncharacterized HTH-type transcriptional regulator SCO4158 1
Uncharacterized HTH-type transcriptional regulator YcjW 1
Uncharacterized HTH-type transcriptional regulator YkvZ 1
Uncharacterized HTH-type transcriptional regulator YvdE 1
Uncharacterized HTH-type transcriptional regulator in aml 5'region 1

Protein length

Min length 331
Max length 332
Mean length (sd) 331.9 (0.4)
Median length 332.0

Protein length distribution