PF02050


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02050, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02050
Description Flagellar FliJ protein

Occurence in the database

PF02050 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_454 FBDBKF_00610 101943 102386 1 fliJ flagellar export protein FliJ Morganella morganii S1
1 group_454 EHELCC_00935 206482 206925 -1 fliJ flagellar export protein FliJ Morganella morganii S2
2 group_454 NLDBIP_02525 473211 473654 1 fliJ flagellar export protein FliJ Morganella morganii S4
3 group_454 LHKJJB_04040 80452 80895 1 fliJ flagellar export protein FliJ Morganella morganii S3
4 group_454 HKOGLL_03005 206687 207130 -1 fliJ flagellar export protein FliJ Morganella morganii S5
5 group_454 F4V73_RS06620 1378860 1379303 1 fliJ flagellar export protein FliJ Morganella psychrotolerans
6 group_454 PMI_RS07980 1748087 1748533 1 fliJ flagellar export protein FliJ Proteus mirabilis HI4320