PF02040


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02040, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02040
Description Arsenical pump membrane protein

Occurence in the database

PF02040 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_911 FBDBKF_04905 188465 189754 -1 arsB Na+/H+ antiporter NhaD or related arsenite permease Morganella morganii S1
1 group_911 EHELCC_06195 247922 249211 -1 arsB Na+/H+ antiporter NhaD or related arsenite permease Morganella morganii S2
2 group_911 NLDBIP_06515 288987 290276 -1 arsB Na+/H+ antiporter NhaD or related arsenite permease Morganella morganii S4
3 group_911 LHKJJB_03395 266511 267800 -1 arsB Na+/H+ antiporter NhaD or related arsenite permease Morganella morganii S3
4 group_911 HKOGLL_06870 188375 189664 -1 arsB Na+/H+ antiporter NhaD or related arsenite permease Morganella morganii S5
5 group_911 F4V73_RS04895 1040855 1042144 -1 arsenic transporter Morganella psychrotolerans
6 group_911 PMI_RS10600 2332180 2333469 -1 arsenic transporter Proteus mirabilis HI4320