PF02021


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02021, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02021
Description Uncharacterised protein family UPF0102

Occurence in the database

PF02021 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_708 FBDBKF_03070 13958 14320 1 yraN YraN family protein Morganella morganii S1
1 group_708 EHELCC_07465 232783 233145 -1 yraN YraN family protein Morganella morganii S2
2 group_708 NLDBIP_07790 232656 233018 -1 yraN YraN family protein Morganella morganii S4
3 group_708 LHKJJB_07325 196402 196764 -1 yraN YraN family protein Morganella morganii S3
4 group_708 HKOGLL_03605 36623 36985 1 yraN YraN family protein Morganella morganii S5
5 group_708 F4V73_RS11850 524913 525275 -1 YraN family protein Morganella psychrotolerans
6 group_708 PMI_RS18365 4030210 4030587 -1 YraN family protein Proteus mirabilis HI4320