Orthogroup:group_779


Homologs in group_779

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03605 FBDBKF_03605 Morganella morganii S1 frdB succinate dehydrogenase/fumarate reductase iron-sulfur subunit
EHELCC_06930 EHELCC_06930 Morganella morganii S2 frdB succinate dehydrogenase/fumarate reductase iron-sulfur subunit
NLDBIP_07255 NLDBIP_07255 Morganella morganii S4 frdB succinate dehydrogenase/fumarate reductase iron-sulfur subunit
LHKJJB_06790 LHKJJB_06790 Morganella morganii S3 frdB succinate dehydrogenase/fumarate reductase iron-sulfur subunit
HKOGLL_04140 HKOGLL_04140 Morganella morganii S5 frdB succinate dehydrogenase/fumarate reductase iron-sulfur subunit
F4V73_RS11265 F4V73_RS11265 Morganella psychrotolerans - succinate dehydrogenase/fumarate reductase iron-sulfur subunit
PMI_RS17845 PMI_RS17845 Proteus mirabilis HI4320 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit

Distribution of group_779 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_779 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_779

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_779.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 frdB 5
2 - 2

Product

# Product Occurence
1 succinate dehydrogenase/fumarate reductase iron-sulfur subunit 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0479 7 C Energy production and conversion (C) Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13085 7 2Fe-2S iron-sulfur cluster binding domain
PF13237 7 4Fe-4S dicluster domain

Annotations of the 55 SwissProt hits

Annotation Number of occurrences
8-methylmenaquinol:fumarate reductase iron-sulfur subunit 1
Fumarate reductase (CoM/CoB) subunit B 1
Fumarate reductase iron-sulfur subunit 11
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 4
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial 2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial 2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial 1
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial 21
Succinate dehydrogenase iron-sulfur subunit 10
Uncharacterized iron-sulfur protein MJ0092 1
Uncharacterized iron-sulfur protein MMP1067 1

Protein length

Min length 244
Max length 245
Mean length (sd) 244.1 (0.4)
Median length 244.0

Protein length distribution