PF01965


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01965, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 19 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01965
Description DJ-1/PfpI family

Occurence in the database

PF01965 is associated with 19 different proteins (see tab "Protein list" and "Profile")
The 19 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3214 FBDBKF_02795 255814 256599 -1 glxA Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain Morganella morganii S1
1 group_3373 FBDBKF_11705 129090 129671 -1 glxA Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain Morganella morganii S1
2 group_399 FBDBKF_15800 10344 10964 -1 yajL protein deglycase YajL Morganella morganii S1
3 group_3214 EHELCC_03265 643634 644419 -1 glxA Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain Morganella morganii S2
4 group_3373 EHELCC_17625 27433 28014 -1 glxA Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain Morganella morganii S2
5 group_399 EHELCC_19650 1725 2345 1 yajL protein deglycase YajL Morganella morganii S2
6 group_3214 NLDBIP_00195 35717 36502 1 glxA Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain Morganella morganii S4
7 group_3373 NLDBIP_19295 3378 3959 -1 glxA Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain Morganella morganii S4
8 group_399 NLDBIP_19625 2347 2967 -1 yajL protein deglycase YajL Morganella morganii S4
9 group_3214 LHKJJB_01840 356183 356968 -1 glxA Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain Morganella morganii S3
10 group_3373 LHKJJB_18065 27433 28014 -1 glxA Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain Morganella morganii S3
11 group_399 LHKJJB_19595 1725 2345 1 yajL protein deglycase YajL Morganella morganii S3
12 group_3214 HKOGLL_01880 361694 362479 -1 glxA Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain Morganella morganii S5
13 group_3373 HKOGLL_19015 14040 14621 1 glxA Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain Morganella morganii S5
14 group_399 HKOGLL_19505 2347 2967 -1 yajL protein deglycase YajL Morganella morganii S5
15 group_399 F4V73_RS16510 120711 121307 1 yajL protein deglycase YajL Morganella psychrotolerans
16 group_399 PMI_RS00480 126594 127211 -1 yajL protein deglycase YajL Proteus mirabilis HI4320
17 group_399 PMI_RS10585 2328472 2329053 1 DJ-1/PfpI family protein Proteus mirabilis HI4320
18 group_712 PMI_RS18305 4021144 4021794 1 elbB isoprenoid biosynthesis glyoxalase ElbB Proteus mirabilis HI4320