PF01928


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01928, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01928
Description CYTH domain

Occurence in the database

PF01928 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1118 FBDBKF_06375 110254 111222 -1 pPPi Inorganic triphosphatase YgiF, contains CYTH and CHAD domains Morganella morganii S1
1 group_1118 EHELCC_09420 110826 111794 -1 pPPi Inorganic triphosphatase YgiF, contains CYTH and CHAD domains Morganella morganii S2
2 group_1118 NLDBIP_09800 110826 111794 -1 pPPi Inorganic triphosphatase YgiF, contains CYTH and CHAD domains Morganella morganii S4
3 group_1118 LHKJJB_07955 105444 106412 1 pPPi Inorganic triphosphatase YgiF, contains CYTH and CHAD domains Morganella morganii S3
4 group_1118 HKOGLL_07505 105444 106412 1 pPPi Inorganic triphosphatase YgiF, contains CYTH and CHAD domains Morganella morganii S5
5 group_1118 F4V73_RS15550 102831 103796 1 CYTH domain-containing protein Morganella psychrotolerans
6 group_4410 PMI_RS04875 1067184 1067732 -1 cyaB class IV adenylate cyclase Proteus mirabilis HI4320
7 group_1118 PMI_RS11670 2580468 2581391 -1 CYTH domain-containing protein Proteus mirabilis HI4320