Orthogroup:group_1180


Homologs in group_1180

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06805 FBDBKF_06805 Morganella morganii S1 sfcA Malic enzyme
EHELCC_04165 EHELCC_04165 Morganella morganii S2 sfcA Malic enzyme
NLDBIP_04165 NLDBIP_04165 Morganella morganii S4 sfcA Malic enzyme
LHKJJB_09995 LHKJJB_09995 Morganella morganii S3 sfcA Malic enzyme
HKOGLL_08980 HKOGLL_08980 Morganella morganii S5 sfcA Malic enzyme
F4V73_RS00945 F4V73_RS00945 Morganella psychrotolerans - NAD-dependent malic enzyme
PMI_RS03165 PMI_RS03165 Proteus mirabilis HI4320 - NAD-dependent malic enzyme

Distribution of group_1180 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1180 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1180

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1180.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sfcA 5
2 - 2

Product

# Product Occurence
1 Malic enzyme 5
2 NAD-dependent malic enzyme 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0281 7 C Energy production and conversion (C) Malic enzyme

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00390 7 Malic enzyme, N-terminal domain
PF03949 7 Malic enzyme, NAD binding domain

Annotations of the 159 SwissProt hits

Annotation Number of occurrences
Bifunctional malic/malolactic enzyme 1
Malic enzyme, hydrogenosomal 1
Malolactic enzyme 4
NAD-dependent malic enzyme 107
NAD-dependent malic enzyme 1 3
NAD-dependent malic enzyme 1, mitochondrial 1
NAD-dependent malic enzyme 2 3
NAD-dependent malic enzyme 2, mitochondrial 1
NAD-dependent malic enzyme 3 1
NAD-dependent malic enzyme 59 kDa isoform, mitochondrial 1
NAD-dependent malic enzyme 62 kDa isoform, mitochondrial 1
NAD-dependent malic enzyme 65 kDa isoform, mitochondrial 1
NAD-dependent malic enzyme, mitochondrial 3
NAD-dependent malic enzyme, mitochondrial (Fragment) 1
NADP-dependent malic enzyme 15
NADP-dependent malic enzyme (Fragment) 1
NADP-dependent malic enzyme 1 1
NADP-dependent malic enzyme 2 1
NADP-dependent malic enzyme 3 1
NADP-dependent malic enzyme 4, chloroplastic 1
NADP-dependent malic enzyme, chloroplastic 4
NADP-dependent malic enzyme, chloroplastic (Fragment) 1
NADP-dependent malic enzyme, mitochondrial 2
Probable NADP-dependent malic enzyme 1
Putative malate oxidoreductase [NAD] 2

Protein length

Unique protein length 565

Protein length distribution