PF01774


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01774, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01774
Description UreD urease accessory protein

Occurence in the database

PF01774 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1157 FBDBKF_06635 168207 169172 -1 ureH Urease accessory protein UreH Morganella morganii S1
1 group_1157 EHELCC_09680 168779 169744 -1 ureH Urease accessory protein UreH Morganella morganii S2
2 group_1157 NLDBIP_10060 168779 169744 -1 ureH Urease accessory protein UreH Morganella morganii S4
3 group_1157 LHKJJB_07695 47494 48459 1 ureH Urease accessory protein UreH Morganella morganii S3
4 group_1157 HKOGLL_07245 47494 48459 1 ureH Urease accessory protein UreH Morganella morganii S5
5 group_1157 F4V73_RS15300 45152 46117 1 urease accessory protein UreD Morganella psychrotolerans
6 group_1157 PMI_RS18320 4023895 4024719 1 urease accessory protein UreD Proteus mirabilis HI4320