PF01729


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01729, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01729
Description Quinolinate phosphoribosyl transferase, C-terminal domain

Occurence in the database

PF01729 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1452 FBDBKF_09230 75903 76748 1 modD Nicotinate-nucleotide pyrophosphorylase Morganella morganii S1
1 group_1452 EHELCC_10180 69356 70201 -1 modD Nicotinate-nucleotide pyrophosphorylase Morganella morganii S2
2 group_1452 NLDBIP_10525 47627 48472 -1 modD Nicotinate-nucleotide pyrophosphorylase Morganella morganii S4
3 group_1452 LHKJJB_10830 143056 143901 1 modD Nicotinate-nucleotide pyrophosphorylase Morganella morganii S3
4 group_1452 HKOGLL_13890 76357 77202 1 modD Nicotinate-nucleotide pyrophosphorylase Morganella morganii S5
5 group_1452 F4V73_RS10740 279509 280354 -1 modD ModD protein Morganella psychrotolerans
6 group_1452 PMI_RS13200 2929986 2930834 1 modD ModD protein Proteus mirabilis HI4320