Orthogroup:group_1508


Homologs in group_1508

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09750 FBDBKF_09750 Morganella morganii S1 tolR colicin uptake protein TolR
EHELCC_04550 EHELCC_04550 Morganella morganii S2 tolR colicin uptake protein TolR
NLDBIP_04550 NLDBIP_04550 Morganella morganii S4 tolR colicin uptake protein TolR
LHKJJB_14080 LHKJJB_14080 Morganella morganii S3 tolR colicin uptake protein TolR
HKOGLL_12455 HKOGLL_12455 Morganella morganii S5 tolR colicin uptake protein TolR
F4V73_RS00590 F4V73_RS00590 Morganella psychrotolerans tolR colicin uptake protein TolR
PMI_RS02860 PMI_RS02860 Proteus mirabilis HI4320 tolR colicin uptake protein TolR

Distribution of group_1508 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1508 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1508

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1508.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tolR 7

Product

# Product Occurence
1 colicin uptake protein TolR 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0848 7 U Intracellular trafficking, secretion, and vesicular transport (U) Biopolymer transport protein ExbD

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03559 7 biopolymer transport protein ExbD - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02472 7 Biopolymer transport protein ExbD/TolR

Annotations of the 30 SwissProt hits

Annotation Number of occurrences
Biopolymer transport protein ExbD 16
Biopolymer transport protein exbD1 2
Biopolymer transport protein exbD2 3
Putative biopolymer transport protein ExbD 1
Putative biopolymer transport protein ExbD-like 1 2
Tol-Pal system protein TolR 6

Protein length

Unique protein length 141

Protein length distribution