PF01726


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01726, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01726
Description LexA DNA binding domain

Occurence in the database

PF01726 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2423 FBDBKF_19550 17600 18214 1 lexA transcriptional repressor LexA Morganella morganii S1
1 group_2423 EHELCC_16495 17600 18214 1 lexA transcriptional repressor LexA Morganella morganii S2
2 group_2423 NLDBIP_16705 17600 18214 1 lexA transcriptional repressor LexA Morganella morganii S4
3 group_2423 LHKJJB_16765 50296 50910 -1 lexA transcriptional repressor LexA Morganella morganii S3
4 group_2423 HKOGLL_18850 17600 18214 1 lexA transcriptional repressor LexA Morganella morganii S5
5 group_2423 F4V73_RS18575 54104 54718 -1 lexA transcriptional repressor LexA Morganella psychrotolerans
6 group_2423 PMI_RS13550 3005857 3006468 -1 lexA transcriptional repressor LexA Proteus mirabilis HI4320