PF01648


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01648, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01648
Description 4'-phosphopantetheinyl transferase superfamily

Occurence in the database

PF01648 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_234 FBDBKF_01395 273265 273651 -1 acpS Phosphopantetheinyl transferase (holo-ACP synthase) Morganella morganii S1
1 group_3020 FBDBKF_17910 22007 22756 1 sfp Phosphopantetheinyl transferase Morganella morganii S1
2 group_234 EHELCC_00150 35217 35603 1 acpS Phosphopantetheinyl transferase (holo-ACP synthase) Morganella morganii S2
3 group_3020 EHELCC_06425 13620 14369 -1 sfp Phosphopantetheinyl transferase Morganella morganii S2
4 group_234 NLDBIP_03310 644533 644919 -1 acpS Phosphopantetheinyl transferase (holo-ACP synthase) Morganella morganii S4
5 group_3020 NLDBIP_06745 13493 14242 -1 sfp Phosphopantetheinyl transferase Morganella morganii S4
6 group_234 LHKJJB_04825 251774 252160 -1 acpS Phosphopantetheinyl transferase (holo-ACP synthase) Morganella morganii S3
7 group_234 HKOGLL_02220 35422 35808 1 acpS Phosphopantetheinyl transferase (holo-ACP synthase) Morganella morganii S5
8 group_3020 HKOGLL_04645 255399 256148 1 sfp Phosphopantetheinyl transferase Morganella morganii S5
9 group_234 F4V73_RS02000 434880 435269 1 acpS holo-ACP synthase Morganella psychrotolerans
10 group_3020 F4V73_RS12020 557924 558556 1 4'-phosphopantetheinyl transferase superfamily protein Morganella psychrotolerans
11 group_234 PMI_RS09300 2031639 2032019 -1 acpS holo-ACP synthase Proteus mirabilis HI4320
12 group_3020 PMI_RS12865 2855658 2856407 1 4'-phosphopantetheinyl transferase superfamily protein Proteus mirabilis HI4320
13 group_234 PMI_RS14400 3193893 3194261 -1 acpS holo-ACP synthase Proteus mirabilis HI4320