PF01592


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01592, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01592
Description NifU-like N terminal domain

Occurence in the database

PF01592 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_525 FBDBKF_01130 210334 210720 -1 iscU Fe-S cluster assembly scaffold protein IscU, NifU family Morganella morganii S1
1 group_525 EHELCC_00415 98148 98534 1 iscU Fe-S cluster assembly scaffold protein IscU, NifU family Morganella morganii S2
2 group_525 NLDBIP_03045 581602 581988 -1 iscU Fe-S cluster assembly scaffold protein IscU, NifU family Morganella morganii S4
3 group_525 LHKJJB_04560 188843 189229 -1 iscU Fe-S cluster assembly scaffold protein IscU, NifU family Morganella morganii S3
4 group_525 HKOGLL_02485 98353 98739 1 iscU Fe-S cluster assembly scaffold protein IscU, NifU family Morganella morganii S5
5 group_525 F4V73_RS07200 1498352 1498738 -1 iscU Fe-S cluster assembly scaffold IscU Morganella psychrotolerans
6 group_525 PMI_RS09175 2000430 2000816 -1 iscU Fe-S cluster assembly scaffold IscU Proteus mirabilis HI4320