PF01544


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01544, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01544
Description CorA-like Mg2+ transporter protein

Occurence in the database

PF01544 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_996 FBDBKF_05565 120381 121364 -1 zntB zinc transporter ZntB Morganella morganii S1
1 group_2781 FBDBKF_08370 49807 50757 1 corA magnesium/cobalt transporter CorA Morganella morganii S1
2 group_996 EHELCC_12025 60130 61113 1 zntB zinc transporter ZntB Morganella morganii S2
3 group_2781 EHELCC_13155 112968 113918 -1 corA magnesium/cobalt transporter CorA Morganella morganii S2
4 group_996 NLDBIP_12365 60085 61068 1 zntB zinc transporter ZntB Morganella morganii S4
5 group_2781 NLDBIP_13495 112968 113918 -1 corA magnesium/cobalt transporter CorA Morganella morganii S4
6 group_996 LHKJJB_12225 60130 61113 1 zntB zinc transporter ZntB Morganella morganii S3
7 group_2781 LHKJJB_13060 48525 49475 1 corA magnesium/cobalt transporter CorA Morganella morganii S3
8 group_996 HKOGLL_10840 60130 61113 1 zntB zinc transporter ZntB Morganella morganii S5
9 group_2781 HKOGLL_11970 112968 113918 -1 corA magnesium/cobalt transporter CorA Morganella morganii S5
10 group_996 F4V73_RS03740 794011 794994 1 zntB zinc transporter ZntB Morganella psychrotolerans
11 group_2781 F4V73_RS09570 14522 15472 1 corA magnesium/cobalt transporter CorA Morganella psychrotolerans
12 group_996 PMI_RS06585 1442450 1443433 -1 zntB zinc transporter ZntB Proteus mirabilis HI4320