PF01182


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01182, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01182
Description Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase

Occurence in the database

PF01182 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_329 FBDBKF_09920 80977 81786 1 nagB glucosamine-6-phosphate deaminase Morganella morganii S1
1 group_329 EHELCC_04720 272942 273751 1 nagB glucosamine-6-phosphate deaminase Morganella morganii S2
2 group_329 NLDBIP_04720 272738 273547 1 nagB glucosamine-6-phosphate deaminase Morganella morganii S4
3 group_329 LHKJJB_13910 61831 62640 -1 nagB glucosamine-6-phosphate deaminase Morganella morganii S3
4 group_329 HKOGLL_12625 81758 82567 1 nagB glucosamine-6-phosphate deaminase Morganella morganii S5
5 group_329 F4V73_RS00430 90797 91603 -1 nagB glucosamine-6-phosphate deaminase Morganella psychrotolerans
6 group_329 F4V73_RS04935 1049063 1049839 1 glucosamine-6-phosphate deaminase Morganella psychrotolerans
7 group_329 PMI_RS02275 523652 524458 -1 nagB glucosamine-6-phosphate deaminase Proteus mirabilis HI4320