PF01155


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01155, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01155
Description Hydrogenase/urease nickel incorporation, metallochaperone, hypA

Occurence in the database

PF01155 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_784 FBDBKF_03630 129647 129988 -1 hypA hydrogenase maturation nickel metallochaperone HypA Morganella morganii S1
1 group_3096 FBDBKF_19295 6504 6824 1 hypA hydrogenase maturation nickel metallochaperone HypA Morganella morganii S1
2 group_784 EHELCC_06905 117115 117456 1 hypA hydrogenase maturation nickel metallochaperone HypA Morganella morganii S2
3 group_3096 EHELCC_07580 253595 253915 1 hypA hydrogenase maturation nickel metallochaperone HypA Morganella morganii S2
4 group_784 NLDBIP_07230 116988 117329 1 hypA hydrogenase maturation nickel metallochaperone HypA Morganella morganii S4
5 group_3096 NLDBIP_07905 253468 253788 1 hypA hydrogenase maturation nickel metallochaperone HypA Morganella morganii S4
6 group_784 LHKJJB_06765 80734 81075 1 hypA hydrogenase maturation nickel metallochaperone HypA Morganella morganii S3
7 group_3096 LHKJJB_07440 217214 217534 1 hypA hydrogenase maturation nickel metallochaperone HypA Morganella morganii S3
8 group_3096 HKOGLL_03490 15853 16173 -1 hypA hydrogenase maturation nickel metallochaperone HypA Morganella morganii S5
9 group_784 HKOGLL_04165 152312 152653 -1 hypA hydrogenase maturation nickel metallochaperone HypA Morganella morganii S5
10 group_784 F4V73_RS11235 388639 388980 1 hypA hydrogenase maturation nickel metallochaperone HypA Morganella psychrotolerans
11 group_3096 F4V73_RS12055 565193 565534 1 hypA hydrogenase maturation nickel metallochaperone HypA Morganella psychrotolerans
12 group_784 PMI_RS17820 3915840 3916181 1 hypA hydrogenase maturation nickel metallochaperone HypA Proteus mirabilis HI4320