Orthogroup:group_54


Homologs in group_54

Help

14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13840 FBDBKF_13840 Morganella morganii S1 terZ Stress response protein SCP2
FBDBKF_13845 FBDBKF_13845 Morganella morganii S1 terZ Stress response protein SCP2
EHELCC_11510 EHELCC_11510 Morganella morganii S2 terZ Stress response protein SCP2
EHELCC_11515 EHELCC_11515 Morganella morganii S2 terZ Stress response protein SCP2
NLDBIP_11855 NLDBIP_11855 Morganella morganii S4 terZ Stress response protein SCP2
NLDBIP_11860 NLDBIP_11860 Morganella morganii S4 terZ Stress response protein SCP2
LHKJJB_11715 LHKJJB_11715 Morganella morganii S3 terZ Stress response protein SCP2
LHKJJB_11720 LHKJJB_11720 Morganella morganii S3 terZ Stress response protein SCP2
HKOGLL_10325 HKOGLL_10325 Morganella morganii S5 terZ Stress response protein SCP2
HKOGLL_10330 HKOGLL_10330 Morganella morganii S5 terZ Stress response protein SCP2
F4V73_RS12705 F4V73_RS12705 Morganella psychrotolerans - TerD family protein
F4V73_RS12710 F4V73_RS12710 Morganella psychrotolerans - TerD family protein
PMI_RS11790 PMI_RS11790 Proteus mirabilis HI4320 - TerD family protein
PMI_RS11795 PMI_RS11795 Proteus mirabilis HI4320 terD tellurium resistance membrane protein TerD

Distribution of group_54 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_54 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_54

Orthogroup content: 14 members

Help

This page summarizes the annotation of all members of the orthologous group group_54.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 terZ 10
2 - 3
3 terD 1

Product

# Product Occurence
1 Stress response protein SCP2 10
2 TerD family protein 3
3 tellurium resistance membrane protein TerD 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2310 14 T Signal transduction mechanisms (T) Stress response protein SCP2

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05795 14 tellurium resistance protein TerD - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02342 14 TerD domain

AMR gene Annotation(s)

Gene Occurences Description Scope Type Class Subclass HMM
terD 1 tellurium resistance membrane protein TerD plus STRESS TELLURIUM TELLURIUM None

Annotations of the 15 SwissProt hits

Annotation Number of occurrences
Chemical-damaging agent resistance protein B 1
Chemical-damaging agent resistance protein C 1
General stress protein 16U 1
Stress response protein SCP2 1
Tellurium resistance protein TerA 1
Tellurium resistance protein TerD 2
Tellurium resistance protein TerE 2
Tellurium resistance protein TerX 1
Tellurium resistance protein TerZ 1
Uncharacterized protein YceE 1
Uncharacterized protein slr1764 1
cAMP-binding protein 1 1
cAMP-binding protein 2 1

Protein length

Min length 191
Max length 192
Mean length (sd) 191.5 (0.5)
Median length 191.5

Protein length distribution