Orthogroup:group_54


Homologs in group_54

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03630 FBDBKF_03630 Morganella morganii S1 hypA hydrogenase maturation nickel metallochaperone HypA
FBDBKF_19295 FBDBKF_19295 Morganella morganii S1 hypA hydrogenase maturation nickel metallochaperone HypA
EHELCC_06905 EHELCC_06905 Morganella morganii S2 hypA hydrogenase maturation nickel metallochaperone HypA
EHELCC_07580 EHELCC_07580 Morganella morganii S2 hypA hydrogenase maturation nickel metallochaperone HypA
NLDBIP_07230 NLDBIP_07230 Morganella morganii S4 hypA hydrogenase maturation nickel metallochaperone HypA
NLDBIP_07905 NLDBIP_07905 Morganella morganii S4 hypA hydrogenase maturation nickel metallochaperone HypA
LHKJJB_06765 LHKJJB_06765 Morganella morganii S3 hypA hydrogenase maturation nickel metallochaperone HypA
LHKJJB_07440 LHKJJB_07440 Morganella morganii S3 hypA hydrogenase maturation nickel metallochaperone HypA
HKOGLL_03490 HKOGLL_03490 Morganella morganii S5 hypA hydrogenase maturation nickel metallochaperone HypA
HKOGLL_04165 HKOGLL_04165 Morganella morganii S5 hypA hydrogenase maturation nickel metallochaperone HypA
F4V73_RS11235 F4V73_RS11235 Morganella psychrotolerans hypA hydrogenase maturation nickel metallochaperone HypA
F4V73_RS12055 F4V73_RS12055 Morganella psychrotolerans hypA hydrogenase maturation nickel metallochaperone HypA
PMI_RS17820 PMI_RS17820 Proteus mirabilis HI4320 hypA hydrogenase maturation nickel metallochaperone HypA

Distribution of group_54 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_54 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_54

Orthogroup content: 13 members

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This page summarizes the annotation of all members of the orthologous group group_54.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hypA 13

Product

# Product Occurence
1 hydrogenase maturation nickel metallochaperone HypA 13

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0375 13 O Posttranslational modification, protein turnover, chaperones (O) Hydrogenase maturation factor HypA/HybF, metallochaperone involved in Ni insertion

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04651 13 hydrogenase nickel incorporation protein HypA/HybF - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01155 13 Hydrogenase/urease nickel incorporation, metallochaperone, hypA

Annotations of the 134 SwissProt hits

Annotation Number of occurrences
Guanidine hydrolase-activating protein A 1
Hydrogenase maturation factor HybF 10
Hydrogenase maturation factor HypA 119
Hydrogenase maturation factor HypA 1 2
Hydrogenase maturation factor HypA 2 2

Protein length

Min length 106
Max length 113
Mean length (sd) 110.3 (3.5)
Median length 113.0

Protein length distribution