PF01144


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01144, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01144
Description Coenzyme A transferase

Occurence in the database

PF01144 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2847 FBDBKF_10595 80781 81431 1 atoD acetate CoA-transferase subunit alpha Morganella morganii S1
1 group_2848 FBDBKF_10600 81442 82107 1 atoA Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit Morganella morganii S1
2 group_2847 EHELCC_14930 80771 81421 1 atoD acetate CoA-transferase subunit alpha Morganella morganii S2
3 group_2848 EHELCC_14935 81432 82097 1 atoA Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit Morganella morganii S2
4 group_2847 NLDBIP_14760 80771 81421 1 atoD acetate CoA-transferase subunit alpha Morganella morganii S4
5 group_2848 NLDBIP_14765 81432 82097 1 atoA Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit Morganella morganii S4
6 group_2848 LHKJJB_14580 59629 60294 -1 atoA Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit Morganella morganii S3
7 group_2847 LHKJJB_14585 60305 60955 -1 atoD acetate CoA-transferase subunit alpha Morganella morganii S3
8 group_2848 HKOGLL_13200 59629 60294 -1 atoA Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit Morganella morganii S5
9 group_2847 HKOGLL_13205 60305 60955 -1 atoD acetate CoA-transferase subunit alpha Morganella morganii S5
10 group_2847 F4V73_RS14305 83328 83978 1 atoD acetate CoA-transferase subunit alpha Morganella psychrotolerans
11 group_2848 F4V73_RS14310 83990 84655 1 3-oxoacid CoA-transferase subunit B Morganella psychrotolerans