PF01135


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01135, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01135
Description Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)

Occurence in the database

PF01135 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2350 FBDBKF_18975 13401 14027 -1 pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase Morganella morganii S1
1 group_2350 EHELCC_18720 13401 14027 -1 pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase Morganella morganii S2
2 group_2350 NLDBIP_18585 11486 12112 1 pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase Morganella morganii S4
3 group_2350 LHKJJB_18590 13401 14027 -1 pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase Morganella morganii S3
4 group_2350 HKOGLL_18325 13401 14027 -1 pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase Morganella morganii S5
5 group_2350 F4V73_RS13885 414822 415448 -1 protein-L-isoaspartate(D-aspartate) O-methyltransferase Morganella psychrotolerans
6 group_2350 PMI_RS11025 2428347 2428973 -1 protein-L-isoaspartate(D-aspartate) O-methyltransferase Proteus mirabilis HI4320