Orthogroup:group_2384


Homologs in group_2384

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19170 FBDBKF_19170 Morganella morganii S1 rplF 50S ribosomal protein L6
EHELCC_18915 EHELCC_18915 Morganella morganii S2 rplF 50S ribosomal protein L6
NLDBIP_18930 NLDBIP_18930 Morganella morganii S4 rplF 50S ribosomal protein L6
LHKJJB_18785 LHKJJB_18785 Morganella morganii S3 rplF 50S ribosomal protein L6
HKOGLL_18520 HKOGLL_18520 Morganella morganii S5 rplF 50S ribosomal protein L6
F4V73_RS18995 F4V73_RS18995 Morganella psychrotolerans rplF 50S ribosomal protein L6
PMI_RS16225 PMI_RS16225 Proteus mirabilis HI4320 rplF 50S ribosomal protein L6

Distribution of group_2384 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2384 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2384

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2384.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rplF 7

Product

# Product Occurence
1 50S ribosomal protein L6 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0097 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L6P/L9E

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02933 7 large subunit ribosomal protein L6 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00347 7 Ribosomal protein L6

Annotations of the 517 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein uL6 516
Large ribosomal subunit protein uL6c 1

Protein length

Unique protein length 177

Protein length distribution