PF01113


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01113, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01113
Description Dihydrodipicolinate reductase, N-terminus

Occurence in the database

PF01113 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1126 FBDBKF_06430 124460 125275 -1 dapB 4-hydroxy-tetrahydrodipicolinate reductase Morganella morganii S1
1 group_1126 EHELCC_09475 125032 125847 -1 dapB 4-hydroxy-tetrahydrodipicolinate reductase Morganella morganii S2
2 group_1126 NLDBIP_09855 125032 125847 -1 dapB 4-hydroxy-tetrahydrodipicolinate reductase Morganella morganii S4
3 group_1126 LHKJJB_07900 91391 92206 1 dapB 4-hydroxy-tetrahydrodipicolinate reductase Morganella morganii S3
4 group_1126 HKOGLL_07450 91391 92206 1 dapB 4-hydroxy-tetrahydrodipicolinate reductase Morganella morganii S5
5 group_1126 F4V73_RS15495 88524 89339 1 dapB 4-hydroxy-tetrahydrodipicolinate reductase Morganella psychrotolerans
6 group_1126 PMI_RS00095 30879 31700 1 dapB 4-hydroxy-tetrahydrodipicolinate reductase Proteus mirabilis HI4320