Orthogroup:group_1188


Homologs in group_1188

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06850 FBDBKF_06850 Morganella morganii S1 dcuC anaerobic C4-dicarboxylate transporter DcuC
EHELCC_04120 EHELCC_04120 Morganella morganii S2 dcuC anaerobic C4-dicarboxylate transporter DcuC
NLDBIP_04120 NLDBIP_04120 Morganella morganii S4 dcuC anaerobic C4-dicarboxylate transporter DcuC
LHKJJB_09950 LHKJJB_09950 Morganella morganii S3 dcuC anaerobic C4-dicarboxylate transporter DcuC
HKOGLL_09025 HKOGLL_09025 Morganella morganii S5 dcuC anaerobic C4-dicarboxylate transporter DcuC
F4V73_RS01000 F4V73_RS01000 Morganella psychrotolerans dcuC anaerobic C4-dicarboxylate transporter DcuC
PMI_RS03210 PMI_RS03210 Proteus mirabilis HI4320 dcuC anaerobic C4-dicarboxylate transporter DcuC

Distribution of group_1188 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1188 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1188

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1188.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dcuC 7

Product

# Product Occurence
1 anaerobic C4-dicarboxylate transporter DcuC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3069 7 C Energy production and conversion (C) C4-dicarboxylate transporter DcuC

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03326 7 C4-dicarboxylate transporter, DcuC family - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03606 7 C4-dicarboxylate anaerobic carrier

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Anaerobic C4-dicarboxylate transporter DcuC 4
Probable anaerobic C4-dicarboxylate transporter DcuC 1
Putative cryptic C4-dicarboxylate transporter DcuD 1
Putative uncharacterized transporter HI_0585 1

Protein length

Min length 453
Max length 466
Mean length (sd) 461.3 (3.9)
Median length 462.0

Protein length distribution