PF00962


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00962, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00962
Description Adenosine deaminase

Occurence in the database

PF00962 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_922 FBDBKF_05005 6400 7395 1 add adenosine deaminase Morganella morganii S1
1 group_922 EHELCC_12585 174099 175094 -1 add adenosine deaminase Morganella morganii S2
2 group_922 NLDBIP_12925 174054 175049 -1 add adenosine deaminase Morganella morganii S4
3 group_922 LHKJJB_12785 174099 175094 -1 add adenosine deaminase Morganella morganii S3
4 group_922 HKOGLL_11400 174099 175094 -1 add adenosine deaminase Morganella morganii S5
5 group_922 F4V73_RS05450 1159054 1160061 1 add adenosine deaminase Morganella psychrotolerans
6 group_922 PMI_RS06270 1375181 1376182 1 add adenosine deaminase Proteus mirabilis HI4320