Orthogroup:group_989


Homologs in group_989

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05475 FBDBKF_05475 Morganella morganii S1 fadR fatty acid metabolism transcriptional regulator FadR
EHELCC_12115 EHELCC_12115 Morganella morganii S2 fadR fatty acid metabolism transcriptional regulator FadR
NLDBIP_12455 NLDBIP_12455 Morganella morganii S4 fadR fatty acid metabolism transcriptional regulator FadR
LHKJJB_12315 LHKJJB_12315 Morganella morganii S3 fadR fatty acid metabolism transcriptional regulator FadR
HKOGLL_10930 HKOGLL_10930 Morganella morganii S5 fadR fatty acid metabolism transcriptional regulator FadR
F4V73_RS03825 F4V73_RS03825 Morganella psychrotolerans fadR fatty acid metabolism transcriptional regulator FadR
PMI_RS07320 PMI_RS07320 Proteus mirabilis HI4320 fadR fatty acid metabolism transcriptional regulator FadR

Distribution of group_989 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_989 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_989

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_989.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fadR 7

Product

# Product Occurence
1 fatty acid metabolism transcriptional regulator FadR 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2186 7 K Transcription (K) DNA-binding transcriptional regulator, FadR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03603 7 GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00392 7 Bacterial regulatory proteins, gntR family
PF07840 7 FadR C-terminal domain

Annotations of the 147 SwissProt hits

Annotation Number of occurrences
Fatty acid metabolism regulator protein 87
Galactonate operon transcriptional repressor 1
HTH-type transcriptional regulator Mce2R 2
HTH-type transcriptional regulator Rv0792c 1
HTH-type transcriptional repressor NanR 38
Putative L-lactate dehydrogenase operon regulatory protein 2
Pyruvate dehydrogenase complex repressor 6
Uncharacterized HTH-type transcriptional regulator MT0514 1
Uncharacterized HTH-type transcriptional regulator Mb0505 1
Uncharacterized HTH-type transcriptional regulator Mb0601 1
Uncharacterized HTH-type transcriptional regulator Rv0494 1
Uncharacterized HTH-type transcriptional regulator YcbG 1
Uncharacterized HTH-type transcriptional regulator YegW 4
Uncharacterized HTH-type transcriptional regulator YieP 1

Protein length

Min length 237
Max length 239
Mean length (sd) 237.6 (1.0)
Median length 237.0

Protein length distribution