PF00933


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00933, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00933
Description Glycosyl hydrolase family 3 N terminal domain

Occurence in the database

PF00933 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1954 FBDBKF_14660 31729 32751 -1 nagZ beta-N-acetylhexosaminidase Morganella morganii S1
1 group_3505 FBDBKF_17860 33224 35101 1 bglX Periplasmic beta-glucosidase and related glycosidases Morganella morganii S1
2 group_3505 EHELCC_09885 212656 214533 1 bglX Periplasmic beta-glucosidase and related glycosidases Morganella morganii S2
3 group_1954 EHELCC_15465 61805 62827 -1 nagZ beta-N-acetylhexosaminidase Morganella morganii S2
4 group_3505 NLDBIP_10265 212656 214533 1 bglX Periplasmic beta-glucosidase and related glycosidases Morganella morganii S4
5 group_1954 NLDBIP_15995 61805 62827 -1 nagZ beta-N-acetylhexosaminidase Morganella morganii S4
6 group_3505 LHKJJB_07490 2705 4582 -1 bglX Periplasmic beta-glucosidase and related glycosidases Morganella morganii S3
7 group_1954 LHKJJB_15845 53859 54881 1 nagZ beta-N-acetylhexosaminidase Morganella morganii S3
8 group_3505 HKOGLL_07040 2705 4582 -1 bglX Periplasmic beta-glucosidase and related glycosidases Morganella morganii S5
9 group_1954 HKOGLL_14965 53071 54093 1 nagZ beta-N-acetylhexosaminidase Morganella morganii S5
10 group_1954 F4V73_RS07455 1560371 1561393 -1 nagZ beta-N-acetylhexosaminidase Morganella psychrotolerans
11 group_1954 PMI_RS04285 960509 961528 1 nagZ beta-N-acetylhexosaminidase Proteus mirabilis HI4320